Table 3

Projected and observed restriction enzymes fragments

Restriction Enzyme Fragment Sizes (kb)

Probe: PkH_051981

Projected

Observed

Difference

Spans Sequence

Gap(s)


BanII

5.2

Yes

None

No

EcoRV

11.1

Yes

None

No

HindIII

9.8

23

13.2

1 and 2

HpaI

8.7

18

9

1

NciI

4.5

13

8.5

1

Probe: Exon 4

Projected

Observed

Difference

Spans Sequence

Gap(s)


BanII

11.7

22

10

2

EcoRV*

>13.6

40+

?

1 and 2

HindIII

9.8

23

13.2

1 and 2

HpaI

9.3

12

2.7

2

NciI

4.5

13

8.5

1


* The gDNA sequence downstream of the 205 SICAvar gene has not been resolved, thus the location of the next EcoRV site is unknown.

Lapp et al. Malaria Journal 2009 8:181   doi:10.1186/1475-2875-8-181

Open Data