Table 1 |
|
|
A summary of selected features calculated for annotated proteins in Plasmodium falciparum (a total of 5,411 proteins were analysed). |
|
| Feature |
Occurrence |
|
|
|
| BLAST vs. PDB hits with at least 25% identity |
27% |
| Hits vs. Pfam with E-value < 1 × 10-15 |
32% |
| No Pfam hits |
43% |
| Threading Z score > 3.95 |
8% |
| One or more predicted coiled-coil regions |
10% |
| Predicted to be transported out of the RBC (Pexel) |
5% |
| Predicted to contain at least one transmembrane helix |
30% |
| Predicted small molecule binding by SMID |
22% |
| Protein-protein interaction by yeast-two hybrid results |
15% |
| Predicted ≤ 40% disorder or no regular secondary structure |
60% |
| Mean percentage low complexity per sequence |
16% |
|
|
|
|
Joubert and Joubert Malaria Journal 2008 7:90 doi:10.1186/1475-2875-7-90 |
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