Table 1 |
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Oligonucleotide primers. |
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| Primer |
Sequence (5'→ 3')a |
Targetb |
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| P1 |
cgggaattcATGAATAATGATAATATTGGGAG |
pfk1 full length (+) |
| P2 |
cccaagcttTCAGACTTGGTCATGCGGTTC |
pfk1 full length (-) |
| P3 |
cgggaattcGTTGATAAGAAAGGAAAAATAATAGAT |
pfk1 F2 (+) |
| P4 |
cccaagcttATGTACAAATCGATGTTTTGTATA |
pfk1 F2 (-) |
| P5 |
ccgggaattcatTTTAATAATCATGATCATCAGAATC |
pfk1 F3 (+) |
| P6 |
cccaagcttTAAACATTCTTGATCATCTTTTTCC |
pfk1 F3 (-) |
| P7 |
ccgggaattctcAAAAAAGGACAAAACCATCAACTT |
pfk1 F4 (+) |
| P8 |
cccaagcttCATATTTTTTTCCATATCTTTAATG |
pfk1 F4 (-) |
| P9 |
cgcggatccgATGAAAAGCGGATTATTTTCTATG |
pfk2 full length (+) |
| P10 |
ccggaattcTCACAATATATAAACTATATCATCGAATC |
pfk2 full length (-) |
| P11 |
ccgggaattcATAATGATAATGATAATAATAATATTATA |
pfk2 F3 (+) |
| P12 |
cccaagctttTTTAATTCCTTTTTATTATCAATTGT |
pfk2 F3 (-) |
| P13 |
ccgggaattcGAATATCAAGAATATTTACCAAAAAC |
pfk2 F4 (+) |
| P14 |
cccaagcttATTATGAATATGAATATTTGTATTTGA |
pfk2 F4 (-) |
| P15 |
aaactgcagTGAAAACAGAATGCGATTAGTTCG |
pfk1 KO (+) |
| P16 |
cgcggatccGATGATGCAAATGTTAATGGTAC |
pfk1 KO (-) |
| P17 |
aaactgcagTTCTTATCTTATTGAACGGATCTC |
pfk2 KO (+) |
| P18 |
cgcggatccTTGTATGGTATATATAGTAGATGC |
pfk2 KO (-) |
| P19 |
GATAGCGATTTTTTTTACTGTCTG |
hrp2 3'UTR (+) |
| P20 |
GAAATTAACCCTCACTAAAGGG |
plasmid backbone |
| P21 |
aaggaaaaaagcggccgcAATGAATAATGATAATATTGGGAG |
pfk1 (+) |
| P22 |
cccaagcttAGATATAATACCATCCGTTTGG |
pfk1 (-) |
| P23 |
ccggaattcAATGAAAAGCGGATTATTTTCTATG |
pfk2 (+) |
| P24 |
cgcggatccTTGTATGGTATATATAGTAGATGC |
pfk2 (-) |
| P25 |
TTGTTGTGGTTCTACATCTCC |
pfk2 (-) |
| P26 |
CACGAAGCCGCCACACATTGCC |
hrp2 orf1 |
| P27 |
TTTGATCTTGTTCACTATGGC |
pfk1 (-) |
| P28 |
cccaagcttATTACAAAAATAATAATTGAAATTACT |
pfk2 (-) |
| P29 |
GTAATACGACTCACTATAGGGC |
plasmid backbone |
| P30 |
TTGCAATTCTGCTTCAGTTGG |
cam (-) |
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a Sequences shown in upper case are gene specific. Underlined sequences indicate enzyme restriction sites. b + and - indicate sense and anti-sense strand sequences, respectively. |
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Waller et al. Malaria Journal 2008 7:19 doi:10.1186/1475-2875-7-19 |
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