Table 1

Laboratories performing PCR genotyping with assessment of PCR use-effectiveness in 17 in vivo studies of antimalarial drug efficacy

Year
Country
& Site
Laboratory
Method used
N
Unresolved
by PCR
n
Resolved
by PCR
n
PCR Use-
effectiveness
[95%CI]












recurr.
after
day14




2002
Zambia, Maheba
Rouen France
msp2
43
3
40
93.0







[80.9–98.5]
2003
Angola, Kuito
IMT Antwerp
msp1+msp2
8
0
8
100.0







[63.1–100.0]
2003
DRC, Boende
IMT Antwerp
msp1+msp2 +glurp
78
10
68
87.2







[77.7–93.7]
2003
S Sudan, Nuba
Wellcome Trust/Medical College of Malawi
msp1+msp2
54
15
39
72.2







[58.3–83.5]
2003
Uganda, Amudat
Epicentre Mbarara
msp1+msp2 +glurp
73
4
69
94.5







[86.6–98.5]
2003
Uganda, Jinja
UCSF
msp2
27
2
25
92.6







[75.7–99.1]
2003
Uganda, Kampala
UCSF
msp2
14
0
14
100.0







[76.8–100.0]*
2004
Angola, Caala
Mbarara University
msp1+msp2 +glurp
6
2
4
66.7







[22.3–95.7]
2004
Congo, Kindamba
SMRU
msp1+msp2 +glurp
60
24
36
60.0







[46.5–72.4]
2004
DRC, Kabalo
Epicentre Mbarara
msp1+msp2 +glurp
10
1
9
90.0







[55.5–99.7]
2004
Guinea, Dabola
Epicentre Mbarara
msp1+msp2 +glurp
14
1
13
92.9







[66.1–99.8]
2004
Sierra Leone, Kailahun
Paris, Avicenne
msp1+msp2
65
1
64
98.5







[91.7–100.0]
2004
Uganda, Apac
UCSF
msp2
76
3
73
96.0







[88.9–99.2]
2004
Uganda, Arua
UCSF
msp2
61
4
57
93.4







[84.1–98.2]
2004
Uganda, Tororo
UCSF
msp2
120
3
117
97.5







[92.9–99.5]
2005
Burkina Faso, Bobo-Dioulasso
UCSF
msp1 +msp2 + 4 microsatellites
24
0
24
100







[85.7–100]*
2005
Uganda, Tororo
UCSF
msp1+msp2
209
4
205
98.1







[95.2–99.5]


TOTAL


942
77
865



Weighted average [CI 95]





91.8 [89.9–93.4]


Median [range]





93.4 [60–100]

Use-effectiveness = number of children with parasite recurrence resolved by PCR/total number of children with recurrences after day 14.

* One sided 97.5% CIs have been calculated

IMT Institut de Médecine Tropicale Antwerp

KEMRI Kenya Medical Research Institute

SMRU Shoklo Malaria Research Unit, Thailand

UCSF University of California, San Francisco

msp1 merozoite surface protein 1

msp2 merozoite surface protein 2

glurp glutamate rich protein

Ashley et al. Malaria Journal 2008 7:154   doi:10.1186/1475-2875-7-154

Open Data