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Genetic diversity at 10 microsatellite loci in Anopheles moucheti from Cameroona, DRC and Uganda. |
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| Cameroona |
DRC |
Uganda |
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|
|
|
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| Locus |
Simbock (2n = 118) |
Olama (2n = 112) |
Nyabessan (2n = 108) |
Mouloundou (2n = 108) |
Kenge (2n = 22) |
Tsakalakuku (2n = 128) |
Bufumira (2n = 114) |
All (2n = 710) |
|
|
|
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| AM1 |
Rs |
5.99 |
6.30 |
5.35 |
6.92 |
5.87 |
NA |
4.41 |
6.46 |
| He |
0.805 |
0.823 |
0.805 |
0.854 |
0.853 |
- |
0.662 |
0.834 |
|
| Fis |
+0.139 |
+0.264 |
+0.347 |
+0.338 |
+0.372 |
- |
-0.037 |
+0.287 |
|
| AM2 |
Rs |
6.06 |
6.87 |
6.0 |
6.67 |
7.75 |
2 |
4.58 |
6.75 |
| He |
0.807 |
0.847 |
0.812 |
0.836 |
0.895 |
0.503 |
0.719 |
0.845 |
|
| Fis |
+0.119 |
+0.186 |
+0.342 |
+0.174 |
+0.267 |
-1 |
+0.321 |
+0.188 |
|
| AM5 |
Rs |
8.06 |
7.22 |
8.63 |
7.37 |
5.70 |
3.39 |
5.76 |
8.87 |
| He |
0.881 |
0.862 |
0.898 |
0.870 |
0.723 |
0.639 |
0.772 |
0.906 |
|
| Fis |
+0.150 |
+0.018 |
+0.069 |
+0.168 |
+0.758 |
-0.027 |
+0.355 |
+0.21 |
|
| AM6 |
Rs |
7.24 |
6.40 |
7.33 |
7.13 |
3.72 |
NA |
2.69 |
7.00 |
| He |
0.872 |
0.826 |
0.870 |
0.850 |
0.671 |
- |
0.482 |
0.847 |
|
| Fis |
+0.283 |
+0.298 |
+0.263 |
+0.202 |
+0.605 |
- |
+0.700 |
+0.382 |
|
| AM9 |
Rs |
6.54 |
6.58 |
7.80 |
5.85 |
5.38 |
NA |
2.31 |
6.63 |
| He |
0.762 |
0.800 |
0.875 |
0.785 |
0.745 |
- |
0.201 |
0.785 |
|
| Fis |
-0.026 |
-0.011 |
+0.042 |
+0.039 |
+0.152 |
- |
-0.074 |
+0.137 |
|
| AM10 |
Rs |
4.28 |
4.14 |
5.49 |
4.73 |
5.00 |
1.94 |
4.31 |
4.85 |
| He |
0.704 |
0.698 |
0.790 |
0.764 |
0.775 |
0.260 |
0.636 |
0.738 |
|
| Fis |
-0.065 |
+0.028 |
+0.110 |
+0.019 |
+0.205 |
+0.107 |
-0.159 |
+0.139 |
|
| AM13 |
Rs |
5.93 |
6.12 |
5.49 |
6.16 |
5.37 |
1 |
4.78 |
5.92 |
| He |
0.823 |
0.824 |
0.802 |
0.830 |
0.737 |
- |
0.669 |
0.848 |
|
| Fis |
+0.008 |
+0.042 |
+0.177 |
+0.077 |
-0.091 |
- |
-0.042 |
+0.292 |
|
| AM15 |
Rs |
7.10 |
6.85 |
8.21 |
7.17 |
6.00 |
6.13 |
1.60 |
7.85 |
| He |
0.820 |
0.822 |
0.869 |
0.818 |
0.834 |
0.825 |
0.083 |
0.844 |
|
| Fis |
+0.188 |
+0.094 |
+0.049 |
+0.119 |
+0.263 |
+0.193 |
-0.025 |
+0.264 |
|
| AM16 |
Rs |
5.98 |
6.69 |
6.20 |
6.37 |
6.59 |
1.45 |
3.20 |
6.39 |
| He |
0.823 |
0.843 |
0.822 |
0.829 |
0.868 |
0.058 |
0.605 |
0.836 |
|
| Fis |
+0.051 |
+0.101 |
+0.076 |
+0.076 |
+0.203 |
+0.327 |
+0.192 |
+0.273 |
|
| AM20 |
Rs |
7.17 |
7.22 |
6.06 |
7.16 |
3.88 |
NA |
3.41 |
6.94 |
| He |
0.844 |
0.832 |
0.788 |
0.848 |
0.634 |
- |
0.532 |
0.839 |
|
| Fis |
+0.218 |
+0.066 |
+0.203 |
+0.083 |
+0.130 |
- |
+0.271 |
+0.249 |
|
|
|
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| Mean across all loci |
Rs |
6.44 |
6.44 |
6.66 |
6.55 |
5.53 |
2.65 |
3.71 |
6.77 |
| He |
0.814 |
0.818 |
0.833 |
0.830 |
0.771 |
0.228 |
0.534 |
0.689 |
|
| Fis |
+0.112 |
+0.114 |
+0.166 |
+0.180 |
+0.291 |
-0.136 |
+0.175 |
NC |
|
|
All: refers to populations pooled. 2n, number of chromosomes scored; Rs, allele richness [14]; He, expected heterozygosity under Hardy-Weinberg equilibrium [51]. Fis was calculated according to Weir & Cockerham [19] and goodness of fit to Hardy-Weinberg equilibrium was estimated by the exact test available in Genepop 3.2 [17]. Bolded values: P < 0.05 after taking into account multiple tests [31]. NA, No PCR product could be detected; -, irrelevant because no polymorphism was detected;NC, not computed. a Data adapted from [12]. | |||||||||
Antonio-Nkondjio et al. Malaria Journal 2008 7:120 doi:10.1186/1475-2875-7-120 |
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