|
Amino acid changes found in PvDBPII gene among 30 Thai isolates, comparing to DBP Sal I sequence. |
|||||||||||||||
| Position of the amino acid |
▼ |
▽ |
▼ |
||||||||||||
|
|
|||||||||||||||
| 268 |
276 |
281 |
306 |
308 |
333 |
351 |
367 |
371 |
375 |
378 |
384 |
385 |
386 |
390 |
|
| SalI |
CGT |
AAC |
GTT |
TTT |
AGG |
CTT |
AGT |
ATC |
AAA |
AAT |
CGC |
GAT |
GAA |
AAG |
CGT |
| Thai |
AGT |
AAT |
GTA |
TTG |
AGT |
TTT |
TGT |
ACC |
GAA |
GAT |
CGT |
GGT |
AAA |
AAT/CAG |
CAT |
| SalI |
R |
N |
V |
F |
R |
L |
S |
I |
K |
N |
R |
D |
E |
K |
R |
| Thai |
S |
N |
V |
L |
S |
F |
C |
T |
E |
D |
R |
G |
K |
N/Q |
H |
| a |
(1/30) |
(1/30) |
(1/30) |
(2/30) |
(8/30) |
(14/30) |
(1/30) |
(2/30) |
(6/30) |
(7/30) |
(30/30) |
(23/30) |
(14/30) |
(13/30) |
(17/30) |
| b |
3 |
3 |
3 |
6 |
26 |
46 |
3 |
6 |
20 |
23 |
100 |
76 |
46 |
43 |
56 |
|
|
|||||||||||||||
| Position of the amino acid |
▼ |
▼ |
▼ |
||||||||||||
|
|
|||||||||||||||
| 398 |
404 |
417 |
419 |
424 |
433 |
436 |
437 |
447 |
464 |
475 |
486 |
503 |
507 |
513 |
|
| Sal I |
TCT |
ACA |
AAT |
ATA |
TTA |
CAG |
AGA |
TGG |
TCA |
ATC |
CCA |
CAA |
ATA |
AAC |
ACG |
| Thai |
ACT |
AGA |
AAA |
ATG |
ATA |
AAG |
ACA |
CGG |
TCC |
ATA |
GCA |
GAA |
AAA |
CAC |
AAG |
| Sal I |
S |
T |
N |
I |
L |
Q |
R |
W |
S |
I |
P |
Q |
I |
N |
T |
| Thai |
T |
R |
K |
M |
I |
K |
T |
R |
S |
I |
A |
E |
K |
H |
K |
| a |
(3/30) |
(3/30) |
(11/30) |
(1/30) |
(26/30) |
(1/30) |
(1/30) |
(19/30) |
(1/30) |
(1/30) |
(3/30) |
(2/30) |
(17/30) |
(1/30) |
(1/30) |
| b |
10 |
10 |
36 |
3 |
86 |
3 |
3 |
63 |
3 |
3 |
10 |
6 |
56 |
3 |
3 |
|
a Showing the detection frequency of each amino acids variant on PvDBPII protein among 30 Thai isolates. b Percentage of detection frequency calculated from value in panel "a". ▼ High prevalence (>50%) of variant amino acids. ▽ Dimorphic mutation (changed into two amino acid-types) | |||||||||||||||
Gosi et al. Malaria Journal 2008 7:112 doi:10.1186/1475-2875-7-112 |
|||||||||||||||