Table 1

Genes selected for genotyping.

HUGO Gene Symbol

Gene name

SNPs genotyped

SNPs analysed for association


MBL2

mannose-binding lectin 2

5

3

MASP1

mannan-binding lectin serine peptidase 1

8

7

MASP2

mannan-binding lectin serine peptidase 2

11

10

FCN1

ficolin 1

9

7

FCN2

ficolin 2

9

9

FCN3

ficolin 3

3

1

SERPING1

serpin peptidase inhibitor (C1 inhibitor)

5

4

C3

complement component 3

7

5

CFB

complement factor B

5

5

CFH

complement factor H

8

6

CFP

complement factor properdin

6

3

THBD

thrombomodulin

5

1

THBS1

thrombospondin 1

4

3

THBS2

thrombospondin 2

4

4

THBS3

thrombospondin 3

2

2

THBS4

thrombospondin 4

2

2

FLT1

fms-related tyrosine kinase 1

5

4

Total number of SNPs

98

76


22 SNPs were excluded from genetic association analyses because of low minor allele frequency, poor genotyping quality, or lack of accordance with Hardy-Weinberg equilibrium. Gene symbols and names are given as defined in the HUGO Gene Nomenclature Committee's database

Holmberg et al. Malaria Journal 2012 11:61   doi:10.1186/1475-2875-11-61

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